CDS

Accession Number TCMCG016C16138
gbkey CDS
Protein Id OMO73800.1
Location join(5940..6321,6428..6624,6789..6967,7107..7254,7382..7456,7548..7653,7745..7839,7983..8168,8263..8349,8644..8709)
Organism Corchorus capsularis
locus_tag CCACVL1_17135

Protein

Length 506aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01011160.1
Definition LytB protein [Corchorus capsularis]
Locus_tag CCACVL1_17135

EGGNOG-MAPPER Annotation

COG_category IM
Description 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KEGG_TC -
KEGG_Module M00096        [VIEW IN KEGG]
KEGG_Reaction R05884        [VIEW IN KEGG]
R08210        [VIEW IN KEGG]
KEGG_rclass RC01137        [VIEW IN KEGG]
RC01487        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K03527        [VIEW IN KEGG]
EC 1.17.7.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00900        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
map00900        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006081        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006090        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0008654        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009240        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016725        [VIEW IN EMBL-EBI]
GO:0019288        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019682        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046429        [VIEW IN EMBL-EBI]
GO:0046490        [VIEW IN EMBL-EBI]
GO:0052592        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGCTGACGACACAACACTTGTCGAAGATAAAATGCGCACCTCCACTACAACCTCACAGATTTTTCCCCACTCCCTCCGCTAACTTGCGCCGATTTCCCCCTCCTCTCTCTCCAATGGCTGCTTCTCTGCAATTATGTCGTTTCTGTATCCTAACTCGTTCCGATAATTTTGGCGGAAGATCGGTAGCTCTTCCTTCCCGGAAGCCTCTCTCCGTTCGATGCTCCGGCGATTCTTCTTCTTCCTCCTCCGTAGCCGTGGATCCCGATAACTTCGATGCCAAGGTTTTCCGACATAACTTGACGAGGAGTAAGAATTATAATAAGAAAGGATTCGGACGCAAGCAGGAAACTCTCGAGCTTATGAACCAAGAGTACACTAGTGATATCATAAAGAAATTGAAGGAAAACGGAAATGAGTATACATGGGGAAATGTTACGGTGAAATTGGCTGAAGCATATGGTTTTTGCTGGGGAGTTGAGAGAGCTGTCCAGATTGCTTATGAAGCGAGAAAACAGTTTCCAGATGAGAGAATTTGGATTACCAATGAAATTATCCACAATCCAACTGTTAACAAGCGGTTAGAAGAGATGGAAGTTAAGAATATTCCGGTTGAGGAAGGGCAGAAACAGTTTGATGTGGTAAACAAGGGCGATGTTGTAGTTTTGCCTGCTTTTGGAGCTGCTGTAGATGAGATGTTGGTCTTGAATGACAAAATGTGCAAATTGTTGATACAACTTGTCCTTGGGTATCTAAGTGTTACTTCTTTGAAGGTATGGAACGTTGTAGAGAAGCACAAGAAAGGAGACTACACTTCAATCATTCATGGAAAATATGCTCATGAGGAGACTATAGCAACTGCATCTTTTGCTGGGACATATATCATAGTGAAGGATATGAAGGAGGCAAATTATGTTTGTGATTACATTCTTGGAGGTCAACTTAATGGATCTAGCTCAACCAAAGAGGAATTTTTAGAGAAATTCAAGAATGCAGTTTCGAAGGGATTCGATCCAGATCGCGACCTAGTAAAAGTTGGCATTGCAAATCAAACTACAATGCTGAAGGGAGAGACAGAGGAAATTGGAAAATTAGTAGAAAAGACAATGATGCAAAAATATGGAGTGGAAAATGTCAACAATCACTTCATAACCTTCAACACAATTTGTGATGCAACACAAGAGCGGCAAGATGCAATGTACAAGTTAGTTGAGGAAGACGTAGATCTCATGTTAGTAGTTGGTGGGTGGAACTCAAGTAACACCTCACACCTTCAAGAAATTTCAGAGGACCGTGGAATCCCCTCATATTGGATTGACAGTGAAGTGAGAATAGGTCCAGGAAACAGAATTGCTCACAAATTGAAACACGGAGAGCTGGTTGAGACAGAAAACTGGCTACCAGAGGGTCCCATCACAATTGGTGTTACATCTGGTGCCTCTACACCAGATAAGGTTGTTGAAGATGCCCTCATCAAGGTGTTTGACATAAAACGAGAAGAAGCCCTGCAAGTAGCATAA
Protein:  
MELTTQHLSKIKCAPPLQPHRFFPTPSANLRRFPPPLSPMAASLQLCRFCILTRSDNFGGRSVALPSRKPLSVRCSGDSSSSSSVAVDPDNFDAKVFRHNLTRSKNYNKKGFGRKQETLELMNQEYTSDIIKKLKENGNEYTWGNVTVKLAEAYGFCWGVERAVQIAYEARKQFPDERIWITNEIIHNPTVNKRLEEMEVKNIPVEEGQKQFDVVNKGDVVVLPAFGAAVDEMLVLNDKMCKLLIQLVLGYLSVTSLKVWNVVEKHKKGDYTSIIHGKYAHEETIATASFAGTYIIVKDMKEANYVCDYILGGQLNGSSSTKEEFLEKFKNAVSKGFDPDRDLVKVGIANQTTMLKGETEEIGKLVEKTMMQKYGVENVNNHFITFNTICDATQERQDAMYKLVEEDVDLMLVVGGWNSSNTSHLQEISEDRGIPSYWIDSEVRIGPGNRIAHKLKHGELVETENWLPEGPITIGVTSGASTPDKVVEDALIKVFDIKREEALQVA